cbioportal
https://github.com/cbioportal/cbioportal
Java
cBioPortal for Cancer Genomics
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- Issues
- [BUG] Several `ResponseEntity<List<T>>` endpoints are missing OpenAPI schema annotations, breaking the generated TS client
- RFC86: Notice of Proposed Relicense — cBioPortal AGPL-3.0 → Apache-2.0 (Comment period: Sep 2–Oct 2, 2026)
- Fix missing OpenAPI schema annotations, and retire more mixins
- [BUG]Entity Stable Id Truncated if Contains Dash Character
- Differentiate between altered, unaltered, and not profiled in the Download tab of Results page
- [FEATURE REQUEST] Expand survival analysis customization (endpoints, anchor points, left truncation, multivariate/forest plots)
- Fix Infinity whisker values in violin plot for categories with no valid numeric data
- Improve the import flow for single-ClickHouse-instance deployments
- Rebuild derived tables via temp-table swap instead of TRUNCATE
- Enable log scale for all numerical variables in Study View X vs Y chart
- Docs
- Java not yet supported