trinityrnaseq
https://github.com/trinityrnaseq/trinityrnaseq
Perl
Trinity RNA-Seq de novo transcriptome assembly
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Help out
- Issues
- Trinity does not considers intron's length significance
- Question about the outcome of Trinity
- Run with "-single x.fastq --run_as_paired"
- Genome Guided Assembly with Multiple Conditions and Replicates
- Error, at least one thread died
- abundance_estimates_to_matrix.pl output counts as nortmalization?
- Create trinity_blast_dataframe.py
- Jellyfish issue
- Trinity GG Intron value
- Issue with phase 2: Read assembly
- Docs
- Perl not yet supported