quast
https://github.com/ablab/quast
AMPL
Genome assembly evaluation tool
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- Issues
- Build: Bundled Minimap2 fails to compile on ARM64 macOS (Apple Silicon)
- Enable Minimap2 compilation on ARM64 platforms
- [Errno 2] No such file or directory: '$HOME/.quast/blast'
- Reads mapping
- Conda install for osx-arm64
- Minimap2 version issue
- Persistent database issue
- Python syntax warnings and errors (python version 3.12)
- Add ANI field
- Quast's disk storage issue
- Docs
- AMPL not yet supported