quast
https://github.com/ablab/quast
AMPL
Genome assembly evaluation tool
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- Issues
- GBFF files as reference
- MetaQuast might *silently* fail to detect references in the no-ref mode
- IndexError: list index out of range
- License issue
- mapped reads count in reads_report
- invalid literal for int() with base 10: 'START_A'
- Error occured while running Busco
- minimap2 cannot works correctly in the "Running Contig Analyzer" step
- Issues about 'quast-download-busco'
- Issues with the installation
- Docs
- AMPL not yet supported