fauna
https://github.com/nextstrain/fauna
Python
RethinkDB database to support real-time virus analysis
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Help out
- Issues
- Bump urllib3 from 1.25.7 to 1.26.5
- Fauna upload and download scripts for seasonal corona viruses
- argument parser in upload.py
- Suggest using direct clinical sample sequence for MEX_CIENI551 Zika genome
- implement caching for geo lookups
- Fix dengue author info
- Sort out why Texas/50 is being dropped
- fauna doesn't work with rethinkdb 2.4
- fauna uploads fail in python 3 unicode error
- Update download_all to work with segments
- Docs
- Python not yet supported