ncov
https://github.com/nextstrain/ncov
Python
Nextstrain build for novel coronavirus (nCoV)
Triage Issues!
When you volunteer to triage issues, you'll receive an email each day with a link to an open issue that needs help in this project. You'll also receive instructions on how to triage issues.
Triage Docs!
Receive a documented method or class from your favorite GitHub repos in your inbox every day. If you're really pro, receive undocumented methods or classes and supercharge your commit history.
Python not yet supported55 Subscribers
Add a CodeTriage badge to ncov
Help out
- Issues
- Alignment steps lead to incorrect insertions and QC issues
- Suggestion to designate SV.2.4 as a major clade
- Suggestion to designate ST.1 as a major clade
- Cumulative root-to-node S1 mutation count
- Remove Nextstrain profiles
- Ensure BA.3.2 shows up on all-time builds not just recent ones
- Replace combine_metadata.py with `augur merge`
- feat: use nightly nextclade tree
- Properly handle CSV-like TSVs
- Add a map of Nextstrain clade to Pango lineage
- Docs
- Python not yet supported