scanpy
https://github.com/scverse/scanpy
Python
Single-cell analysis in Python. Scales to >1M cells.
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- Issues
- Update template to v0.8.0
- feat: pp.scale allow selecting correction
- feat: add min_cells parameter to dotplot
- Support dictionaries for Boolean colors in 'adata.uns'
- ci: pre-commit autoupdate
- fix: guard bw conversion in pl.spatial against missing image
- feat: add Array API support via array-api-compat
- feat: add networkit flavor for parallel Leiden clustering
- feat(preprocessing): add optimal shifted CLR (PFlog1pPF) normalization
- ci: bump codecov/codecov-action from 6 to 7
- Docs
- Python not yet supported