prokka
https://github.com/tseemann/prokka
Perl
:zap: :aquarius: Rapid prokaryotic genome annotation
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- Issues
- Bakta is currently still not a full alternative to Prokka!
- Select multiple annotation modes?
- No annotation of existing genes
- `--proteins` external database doesn't give excpected assignements
- option to include scores in prokka output
- Genes missing /gene field in .gbk output
- Prokka needs blastp 2.2 or higher.
- Annotate several genomes in FASTA format
- tbl2asn no longer available - replaced with table2asn
- commande line
- Docs
- Perl not yet supported