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rstan
353 IssuesRStan, the R interface to Stan
(stan-dev/rstan)lintr
315 IssuesStatic Code Analysis for R
(r-lib/lintr)swirl_courses
208 Issues:mortar_board: A collection of interactive courses for the swirl R package.
(swirldev/swirl_courses)epinowcast
77 IssuesTools to enable flexible and efficient hierarchical nowcasting of epidemiological time-series using a semi-mechanistic Bayesian model with support for a range of reporting and generative processes.
(epinowcast/epinowcast)patchwork
75 IssuesThe Composer of ggplots
(thomasp85/patchwork)tidyr
60 IssuesTidy Messy Data
(tidyverse/tidyr)tidygraph
35 IssuesA tidy API for graph manipulation
(thomasp85/tidygraph)software-review
33 IssuesrOpenSci Software Peer Review.
(ropensci/software-review)desc
21 IssuesManipulate DESCRIPTION files
(r-lib/desc)bench
15 IssuesHigh Precision Timing of R Expressions
(r-lib/bench)gsva
11 IssuesGene set variation analysis for microarray and RNA-seq data
(rcastelo/gsva)cyclocomp
11 IssuesCyclomatic complexity of R functions and expressions
(mangothecat/cyclocomp)rgcca
7 Issues:exclamation: RGCCA — Regularized and Sparse Generalized Canonical Correlation Analysis for Multiblock Data
(llrs/rgcca)packagefinder
6 IssuesComfortable search for R packages on CRAN, either directly from the R console or with an R Studio add-in
(jsugarelli/packagefinder)goodpractice
6 IssuesAdvice on R Package Building
(mangothecat/goodpractice)rsaturday-proposal
5 IssuesA proposal to the R Consortium's Infrastructure Steering Commitee re:community events
(stephlocke/rsaturday-proposal)prefixer
5 IssuesPrefix function with their namespace
(dreamrs/prefixer)namer
4 IssuesR package :package: for labelling chunks of RMarkdown files! :boom:
(lockedata/namer)biocor
4 IssuesPackage to calculate functional similarity between genes
(llrs/biocor)covrpage
2 IssuesCreate a summary readme for the testthat subdirectory to communicate with potential users
(yonicd/covrpage)tidies
1 IssuesA Grammar of Data Manipulation for Omics Data
(lgatto/tidies)multiassayexperiment
1 IssuesBioconductor package for management of multi-assay data
(waldronlab/multiassayexperiment)