scanpy
https://github.com/scverse/scanpy
Python
Single-cell analysis in Python. Scales to >1M cells.
Triage Issues!
When you volunteer to triage issues, you'll receive an email each day with a link to an open issue that needs help in this project. You'll also receive instructions on how to triage issues.
Triage Docs!
Receive a documented method or class from your favorite GitHub repos in your inbox every day. If you're really pro, receive undocumented methods or classes and supercharge your commit history.
Python not yet supported1 Subscribers
Add a CodeTriage badge to scanpy
Help out
- Issues
- feat: update and speedup harmony
- fix: numba jit issue
- UnboundLocalError in normalize_total when Numba JIT is disabled
- Update template to v0.8.0
- feat: pp.scale allow selecting correction
- feat: add min_cells parameter to dotplot
- Support dictionaries for Boolean colors in 'adata.uns'
- ci: pre-commit autoupdate
- fix: guard bw conversion in pl.spatial against missing image
- feat: add Array API support via array-api-compat
- Docs
- Python not yet supported