prokka
https://github.com/tseemann/prokka
Perl
:zap: :aquarius: Rapid prokaryotic genome annotation
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- Issues
- Added support for partial genes prokka-1.12
- Add unique header to prokka annotation stats file
- Multiple EC_number tags for CDSs, lower case initials in /product descriptions for prokka-1.9.1-testing
- preserve contig names with --centre/--compliant
- Metagenomics (many samples): Prokka as input to GhostKOALA
- Installation instruction for HMM databases
- Generating files with original fasta headers
- Proper /inference when --proteins has gi/gb/ref ID
- Accept Glimmer predictions file instead of running Prodigal
- prokka mitochondrial annotation
- Docs
- Perl not yet supported